navis.TreeNeuron.convert_units

TreeNeuron.convert_units(to, inplace=False)

Convert coordinates to different unit.

Only works if neuron’s .units is not dimensionless.

Parameters:

• to (pint.Unit | str) – Units to convert to. If string, must be parsable by pint. See examples.

• inplace (bool, optional) – If True will convert in place. If not will return a copy.

Return type:

Optional[BaseNeuron]

Examples

>>> import navis
>>> n = navis.example_neurons(1)
>>> n.units
<Quantity(8, 'nanometer')>
>>> n.cable_length
266476.8
>>> n2 = n.convert_units('um')
>>> n2.units
<Quantity(1.0, 'micrometer')>
>>> n2.cable_length
2131.8