navis.interfaces.r.data2py

navis.interfaces.r.data2py(data, **kwargs)

Convert data from rcatmaid (e.g. catmaidneuron from read.neuron.catmaid) and converts into Python Data.

Notes

1. Most R data comes as list (even if only 1 entry). This is preserved.

2. R lists with headers are converted to dictionaries

3. R DataFrames are converted to Pandas DataFrames

4. R nblast results are converted to Pandas DataFrames but only the top 100 hits for which we have reverse scores!

Parameters:

data – Any kind of R data. Can be nested (e.g. list of lists)!

Return type:

Converted data or ‘Not converted’ if conversion failed.